scvelo.tl.velocity_confidence¶
-
scvelo.tl.
velocity_confidence
(data, vkey='velocity', copy=False)¶ Computes confidences of velocities.
scv.tl.velocity_confidence(adata) scv.pl.scatter(adata, color="velocity_confidence", perc=[2, 98])
- data:
AnnData
Annotated data matrix.
- vkey: str (default: ‘velocity’)
Name of velocity estimates to be used.
- copy: bool (default: False)
Return a copy instead of writing to adata.
- velocity_length: .obs
Length of the velocity vectors for each individual cell
- velocity_confidence: .obs
Confidence for each cell
- data: