scvelo.set_figure_params

scvelo.set_figure_params(style='scvelo', dpi=100, dpi_save=150, frameon=None, vector_friendly=True, transparent=True, fontsize=12, figsize=None, color_map=None, facecolor=None, format='pdf', ipython_format='png2x')

Set resolution/size, styling and format of figures.

Parameters:

  • style (str (default: None)) – Init default values for matplotlib.rcParams suited for scvelo or scanpy. Use None for the default matplotlib values.

  • dpi (int (default: None)) – Resolution of rendered figures - affects the size of figures in notebooks.

  • dpi_save (int (default: None)) – Resolution of saved figures. This should typically be higher to achieve publication quality.

  • frameon (bool (default: None)) – Add frames and axes labels to scatter plots.

  • vector_friendly (bool (default: True)) – Plot scatter plots using png backend even when exporting as pdf or svg.

  • transparent (bool (default: True)) – Save figures with transparent back ground. Sets rcParams[‘savefig.transparent’].

  • fontsize (int (default: 14)) – Set the fontsize for several rcParams entries.

  • figsize ([float, float] (default: None)) – Width and height for default figure size.

  • color_map (str (default: None)) – Convenience method for setting the default color map.

  • facecolor (str (default: None)) – Sets backgrounds rcParams[‘figure.facecolor’] and rcParams[‘axes.facecolor’] to facecolor.

  • format (str (default: ‘pdf’)) – This sets the default format for saving figures: file_format_figs.

  • ipython_format (list of str (default: ‘png2x’)) – Only concerns the notebook/IPython environment; see IPython.core.display.set_matplotlib_formats for more details.