scvelo.get_df¶
-
scvelo.
get_df
(data, keys=None, layer=None, index=None, columns=None, sort_values=None, dropna='all', precision=None)¶ Get dataframe for a specified adata key.
Return values for specified key (in obs, var, obsm, varm, obsp, varp, uns, or layers) as a dataframe.
- data
AnnData object or a numpy array to get values from.
- keys
Keys from .var_names, .obs_names, .var, .obs, .obsm, .varm, .obsp, .varp, .uns, or .layers.
- layer
Layer of adata to use as expression values.
- index
List to set as index.
- columns
List to set as columns names.
- sort_values
Wether to sort values by first column (sort_values=True) or a specified column.
- dropna
Drop columns/rows that contain NaNs in all (‘all’) or in any entry (‘any’).
- precision
Set precision for pandas dataframe.
- Return type
DataFrame
- Returns
pd.DataFrame
– A dataframe.